SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for AT5G60130.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AT5G60130.1
Domain Number 1 Region: 1-84
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.33e-17
Family B3 DNA binding domain 0.00099
Further Details:      
 
Domain Number 2 Region: 196-287
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000051
Family B3 DNA binding domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) AT5G60130.1
Sequence length 300
Sequence
MVLPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFVMVNGWKRIVKDEDL
KGGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQSEEIKVESDSDEQNQASDDVLSLD
EDDDDSDYNCGEDNDSDDYADEAAVEKDDNDADDEDVDNVADDVPVEDDDYVEAFDSRDH
AKADDDDEDERQYLDDRENPSFTLILNPKKKSQLLIPARVIKDYDLHFPESITLVDPLVK
KFGTLEKQIKIQTNGSVFVKGFGSIIRRNKVKTTDKMIFEIKKTGDNNLVQTIKIHIISG
Download sequence
Identical sequences A0A1P8BAD7
AT5G60130.1 3702.AT5G60130.1-P AT5G60130.1 NP_001330294.1.80155

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]