SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for AT3G18990.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AT3G18990.1
Domain Number 1 Region: 237-338
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.32e-22
Family B3 DNA binding domain 0.0057
Further Details:      
 
Domain Number 2 Region: 3-97
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-22
Family B3 DNA binding domain 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AT3G18990.1
Sequence length 341
Sequence
MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW
FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA
RLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIP
KKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT
NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFS
QGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVNEYV
Download sequence
Identical sequences A0A178VIS1 Q8L3W1
3702.AT3G18990.1-P AT3G18990.1 AT3G18990.1 NP_188529.2.80155

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]