SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|294155573|ref|YP_003559957.1| from Mycoplasma crocodyli MP145

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294155573|ref|YP_003559957.1|
Domain Number 1 Region: 11-245
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 2.63e-38
Family DNA mismatch repair protein MutH from 0.0027
Further Details:      
 
Domain Number 2 Region: 263-499
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 1.72e-32
Family DNA mismatch repair protein MutH from 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294155573|ref|YP_003559957.1|
Sequence length 504
Comment putative type II restriction endonuclease [Mycoplasma crocodyli MP145]
Sequence
MKDLTKYSNKLPYDETNIKDIYNYSQKLLGKTFLDVLSLNYENEDLEDINDYYNNPSNKG
SLGNLLEEYFFYYKPNNSELPDFQKAELELKTTPYEINKNKFIAGERLVISMIPNTNPIE
KEFKNSHLEKKLKNVLMIWYLRNRNKKRIEYSIDYIYLYQLYSKLLSKDLTIILDDYNII
VNKITSGNAHNLSESDTKYLGACTKGSSASQILKPQYYNNKVLAKRRAFSLKQSYMTYIL
NNYIMNNDKEKFDSIFKDEEIIDGNFESKILDKLNFFIGKTEAELYHAFDLNKIIKSKNI
NRILVNKILGVNSDKSEEFQKANIDIKTIRVRKNGTPNESVSFPKIVIKDFVNKIFENSN
EYNYFEKTRFLFVVFKENEEGNYKLAGSKFWNMPINELETIGKKEWELNKKKFLKGVNFK
IEYNNLGKLIVKNDLPKKSETKIFHLRPHSLKSSYIINGIKYGEGSKTDMDELINGDKMT
NQCFWLNSEYIKKIVEDIIKKEKC
Download sequence
Identical sequences D5E5B4
WP_013054236.1.77063 gi|294155573|ref|YP_003559957.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]