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Domain assignment for gi|91782095|ref|YP_557301.1| from Burkholderia xenovorans LB400

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|91782095|ref|YP_557301.1|
Domain Number 1 Region: 10-45
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000994
Family Sigma4 domain 0.058
Further Details:      
 
Weak hits

Sequence:  gi|91782095|ref|YP_557301.1|
Domain Number - Region: 162-298
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00174
Family Retroviral integrase, catalytic domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|91782095|ref|YP_557301.1|
Sequence length 512
Comment transposase [Burkholderia xenovorans LB400]
Sequence
MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALG
DVELEARLFPPPPRVEGERPAPHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCT
RYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGENREAELFVAVLGASNYTYA
EATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS
VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFK
KLPGSRRSTFDEFERSSLKALPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQV
DVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHHQEVSGWGPQRLYDWAIRIG
PHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST
LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
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Identical sequences Q144J0
WP_011487045.1.38508 WP_011487045.1.45576 gi|91782095|ref|YP_557301.1| 266265.Bxe_A3740

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