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Domain assignment for gi|302878922|ref|YP_003847486.1| from Gallionella capsiferriformans ES-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302878922|ref|YP_003847486.1|
Domain Number 1 Region: 401-561
Classification Level Classification E-value
Superfamily Nucleotide cyclase 1.49e-53
Family GGDEF domain 0.0000945
Further Details:      
 
Domain Number 2 Region: 281-385
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 6.81e-26
Family Flavin-binding PAS domain 0.04
Further Details:      
 
Domain Number 3 Region: 213-265
Classification Level Classification E-value
Superfamily HAMP domain-like 0.0000994
Family HAMP domain 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|302878922|ref|YP_003847486.1|
Sequence length 564
Comment PAS/PAC sensor-containing diguanylate cyclase [Gallionella capsiferriformans ES-2]
Sequence
MKNWWQTLDIGSKLNIPIQVLLLLALSFAHIWIMAHIKEEILDGAERRATVSADGIINGM
NMMMLNGTISDPNQRLLFINKMSDTENVKEVRIIRTRQVQDQFGYGLPEEQVRDEMDKRV
ISSKKTDFLLNEDPIAPTLRTVVPFIASSNFRGTNCLTCHKVEAGSVNGAASITIDMTDD
FKAIRRTQGMLWLGQILLQLLLFFATSRLISHVIKPILQLQSSMESMQRCGSMASFVPLP
LDERNQDEIGKLARTFNQMSESLYNSEKSMRLASSIYQSNADAIVVTDENNLIVDVNPAF
TRITGYTLDEVRGKNPRLMQSGQHDIQFYRKMWRAIIDQGHWQGEIWDKRRDGGLYAKSV
NIIALRHQDGSIYRFVAQFSDITEKKQKDELIHWQANYDPLTNLPNRRLFQDRLNQAIKL
AHRTELPLALFFIDLDYFKEINDTLGHANGDVLLMEVARRISSCVREADTVARLGGDEFT
VILPELSDATQILRVAKNIVDKLSQPFFFVNDETGYHVSASIGIANYPQDAMDTKGLIKC
ADKAMYAAKSEGRNRFVYFSNSGQ
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Identical sequences D9SGS5
WP_013293660.1.12990 gi|302878922|ref|YP_003847486.1|

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