SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|302879298|ref|YP_003847862.1| from Gallionella capsiferriformans ES-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|302879298|ref|YP_003847862.1|
Domain Number 1 Region: 234-538
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 2.22e-63
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000617
Further Details:      
 
Domain Number 2 Region: 21-116
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 2.97e-27
Family Flavin-binding PAS domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|302879298|ref|YP_003847862.1|
Sequence length 545
Comment methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor [Gallionella capsiferriformans ES-2]
Sequence
MENKNSYSAQNEVPFPDGVVLISKTDTRGIITYANDEFVAISGYSREELVGKNHNIVRHA
DMPAAAFKWLWDTLHAGRPWRGMVKNRCKNGSFYWVRATVVPIIEQGRTSGYVSMRRKPT
REQIVQAEALYRRHAETGAGFGSSNERFKFSNWSLKSKLQLVIQSALLVVLGIGQFFISV
QLHTDPATELQLLAGQVFLHVFLYFFIGFCVLRYVHNPLEAAKHEIRNVLQGNFDNEIEI
GVGDEVGDMCREVTTMQTYLRMLVDEIVASARHINSYSGALDTQVSGVASSAFVAQEQIQ
AIASTMDEYSQSVAEVAALAADSIEDANSMKNIVDENNHNMEKSITAISRVAETVQSSSH
TMAELGLSIQKIGAISNAIQEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAER
TANSTKDIALTIREISTTSNSAVQSMECAVSEVANGIGLIQKNGDGMQEIMKASVNVSER
ITQISTASRAQSSASISVAKNLSAVKDVVDSNTQAATDAKMTAASLAESANELKHAGHPL
TRCVS
Download sequence
Identical sequences D9SI08
gi|302879298|ref|YP_003847862.1| WP_013294030.1.12990

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]