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Domain assignment for gi|302879369|ref|YP_003847933.1| from Gallionella capsiferriformans ES-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302879369|ref|YP_003847933.1|
Domain Number 1 Region: 406-562
Classification Level Classification E-value
Superfamily Nucleotide cyclase 3.27e-50
Family GGDEF domain 0.0004
Further Details:      
 
Domain Number 2 Region: 284-387
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 5.23e-27
Family Flavin-binding PAS domain 0.063
Further Details:      
 
Domain Number 3 Region: 219-270
Classification Level Classification E-value
Superfamily HAMP domain-like 0.000068
Family HAMP domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|302879369|ref|YP_003847933.1|
Sequence length 565
Comment PAS/PAC sensor-containing diguanylate cyclase [Gallionella capsiferriformans ES-2]
Sequence
MNLKLSWRELGVQKKLHILIQGSLIILFLISMNWVIERFETQIISHAEQRADETADGLIN
GMNLLMLTGAISNPLNRQLLLEKTRRSEGVRELRIVRGDSVVSQFGPGLPEERAQDDMDR
TALATGKSAFRRIDEPGKPPMLRVVVPFIAQKDFRGTNCMSCHNAAEGSVNGLASVNIDL
SQDMANLADIKRSLWIGHLLIQLFLSWLIWLFVRNLIERNIADPVKKLKLTMAEIQHNND
LSKRADVDERNPDIGDMARSFNSLLGTLEQANERLELFAKMFENSSEAIIITDADKRILT
VNPAFELITQYRSEEVIGCDPKILSSGKQTAEYYQAMWSTIEAAGKWSGEIWNRRKNGEV
YPQWLSIGAVKNHNGKVINYISLFSDITQRKEDEHRIEMLAHYDVLTKLPNRALFADRLQ
HALQVADRSHRKVGLMFLDLDKFKAINDTLGHLAGDQLLQSVAERLSRCVRQSDTVCRQG
GDEFMILLEEIHSPLDIEGVAQKIALEMSMPHQMGEESRVVSFSIGAAIYPDHAIDSEKL
SQCADQAMYQAKEAGRNNFKLYGAG
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Identical sequences D9SIK6
WP_013294100.1.12990 gi|302879369|ref|YP_003847933.1|

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