SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|302879442|ref|YP_003848006.1| from Gallionella capsiferriformans ES-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|302879442|ref|YP_003848006.1|
Domain Number 1 Region: 368-482
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 6.11e-29
Family Heme-binding PAS domain 0.00026
Further Details:      
 
Domain Number 2 Region: 472-595
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.7e-17
Family Heme-binding PAS domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|302879442|ref|YP_003848006.1|
Sequence length 680
Comment putative PAS/PAC sensor protein [Gallionella capsiferriformans ES-2]
Sequence
MHSKIFLSAITTWLILAFSLLFSGLVWYWTDQLVLQRANDRFAFQSQDIKQNIIDRMDDY
QSILRGGVALFKASKSVEHHEWKSYVEGLNIQKYFPGIQGLGFAQVITPGALARHEALIR
SQGVADYRGTTLDRRPLNTAIIYLEPLDWRNQRAIGYDMFSEPVRREAMERARDTGDASL
SGKVTLVQETNHNVQNGFLIYQPVYRQGASVTSVEERRAALEGYVYSPFRIDDLMQGLLR
SSLTYVDFHLYDTAKPSPASLLYAYKSKEDHFAYPATTALYDKTLELDIDGRVWTLYVHT
LPGYIPAAEANLPIALGTVSVAFSILLFFYLRSLSHQYQQSLQLTNKIASELHNSEEGAH
ALLEYAPDTVIVIDESGIIQTCNPAGEQLSGWQADEIIGKNVNSLIPSPHREAHDSYLAR
YLESGEGHIIGIGRDVELLHKDGTLIPVNLRIGVQRMSNGQCRFIGFLRDLTERVKIDKA
LKDRDLLFTSMINASTDGLLIADQTGKLLEANDAYCKYSGYSHEALLKMNIRDLESIESS
DKVSLHMEIVNGKGSDLFEANHRAQDGHLLDFEVSMTYTNQTEQPRYLSFYRDITDRKRY
QDNLSNQNLKLEALVDARTTELQQQAAELRTQYAFLEKANRIMVGRELDMIALKQQVNEL
AVQLGEPARYNLSFLDKTDI
Download sequence
Identical sequences D9SIS9
gi|302879442|ref|YP_003848006.1| WP_013294166.1.12990

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]