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Domain assignment for gi|302346769|ref|YP_003815067.1| from Prevotella melaninogenica ATCC 25845

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302346769|ref|YP_003815067.1|
Domain Number 1 Region: 385-587
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000022
Family RecA protein-like (ATPase-domain) 0.085
Further Details:      
 
Domain Number 2 Region: 228-347
Classification Level Classification E-value
Superfamily DNA primase core 0.000000235
Family Primase fragment of primase-helicase protein 0.075
Further Details:      
 
Weak hits

Sequence:  gi|302346769|ref|YP_003815067.1|
Domain Number - Region: 30-98
Classification Level Classification E-value
Superfamily Zinc beta-ribbon 0.0117
Family Putative zinc binding domain 0.077
Further Details:      
 
Domain Number - Region: 135-251
Classification Level Classification E-value
Superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase 0.0824
Family Quinohemoprotein amine dehydrogenase B chain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|302346769|ref|YP_003815067.1|
Sequence length 686
Comment Toprim domain protein [Prevotella melaninogenica ATCC 25845]
Sequence
MIEKEQILLLTQGGLNVFSHFLGFEVNLHRNFRSPFYDDRRASCHIYYDRKTFSYKFYDH
GDTTYSEDCFWFVATLRNLNLKTSFPEVLETIVQELGLYSLCNGGKHSSHITSTYKKTIV
PTPKADITKCTEEHPYSFEIQPFDDGLLNYWAHYGIHEDTLRRFRVRSLKRYESVSAEGR
KFELYSSPTEPMFAYIGNGYVKIYRPHSPKIRFLYGGRMPATYCFGMEQIPAKGDMLFIT
GGEKDVLSLYAHGFNAICFNSETAQIPTSIIESLQLRFRHIILLYDADETGVREAHKQSE
HLVEYKVLNLSLPLSGTKSEKDISDFFALGNGAKELKELLAKMFSDLYSQTMMMLRSCEI
DYENPPDISKSVVAVNGVPLGTQDNLFCITGGEGTGKSNYVGAILAGALGEKRLPIEKTL
GLEITPNPKGLAVLHYDTEQSEAQLHKNLGKTLRRASLTAVPEFCHSLYLASLSRKDRLN
LIRESMDLFHHRHGGIHLVVIDGIADLIRSANDETESIAIVDELYRLAGIYNTCIICVLH
FVPNGIKLRGHIGSELQRKAAGILSIEKDDNPEYSVVKALKVRDGSPLDVPMMLFGWDKA
EDMHVYRGEKSKEDKEKRKTEELIAVVKEAFRNSFKLTYQELCEVLMREMEIKDRTAKKY
IAYMKEQRILAQDTNGNYQKGELCRT
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Identical sequences D9RWJ1
WP_013265412.1.27434 WP_013265412.1.55251 gi|302346769|ref|YP_003815067.1|

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