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Domain assignment for gi|296455086|ref|YP_003662230.1| from Bifidobacterium longum subsp. longum JDM301

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  gi|296455086|ref|YP_003662230.1|
Domain Number - Region: 358-466
Classification Level Classification E-value
Superfamily Bacterial hemolysins 0.0432
Family Hemolysin E (HlyE, ClyA, SheA) 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|296455086|ref|YP_003662230.1|
Sequence length 906
Comment ABC transporter [Bifidobacterium longum subsp. longum JDM301]
Sequence
MRTVWQVFLRDCRRILRNPVAVVVTLGVAMLPSLYAWFNILANWDPYSATGNLQVAVANE
DQGTTNDLVGHLDAGRQVVKKLKQNDELGWRFVDNEEQAVHGVETGGYYAAIVLPKDFSA
SLVESVTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDEQINSAFVTTVATTVASAISE
TGDDLGQATGKVQHDTIDDLNTVMSTLNTVQDSLTDLQDTLAQSDTILADAKQATASLKQ
TVAAAQNASRQSGTLLAETQAGSQAFSTTLVGALDSSSAQLSGLAVHVNNAAGSITGSFN
SAQNSVDTITNTLSAPLNATQTSISDLKDALTKAGIGKDTTDPVGQNIWKQIDALDSLIS
KQQTQLNTFHTDTTQFINSGKDATTNLSGAMTNTTTGGIAALNTARGSLTGTVMPSLTSS
LNSFAALNGTLDGTLTSLSGTLDQADGLFDQLVDTLNQTKTTISSTQDSLRQVASDVATV
RTDIATLDSSAAYQKIRDTLHLDDKGFGDFMGNPVTLTTKVVYATDNYGSAVTPFYTNLA
LWVGGFVLIAIYKLEVDREGIRRITATQAYLGRWLLLVTIGFLQAVIATIGDLVLGIQCE
HPLLFILAGIFCSFVYINIIYALAVAFRHIGKAIAVILVIVQIPGASGLYPIEMMPNFFR
ELHPWLPFTYGINAMRGPIAGLYANHYWLDMLHLFWYLPAALFVGLVIRRYAMNLNALFD
RRLGDTDLMITEHNSMVNEQVSLNSVFRTVSDSKELRDIIAHRAHRFFARYPKMIVAGLA
LLTVLPFVFLVLLFVTQEKIAMLTSWILSIIFIDAYLIVVEYAREAYAMQLGVSAMSADE
FRNVMLNGYVWRRFHGHGRHEAAMDSNPNIGETTERLTPFSDQATEPTAHTAQSGQSGQP
GQGGAR
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Identical sequences D6ZWZ4
WP_013141483.1.10885 WP_013141483.1.48448 WP_013141483.1.86762 gi|296455086|ref|YP_003662230.1|

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