SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|296135946|ref|YP_003643188.1| from Thiomonas intermedia K12

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|296135946|ref|YP_003643188.1|
Domain Number 1 Region: 5-231
Classification Level Classification E-value
Superfamily Folate-binding domain 2.83e-50
Family Aminomethyltransferase folate-binding domain 0.00092
Further Details:      
 
Domain Number 2 Region: 233-310
Classification Level Classification E-value
Superfamily Aminomethyltransferase beta-barrel domain 0.000085
Family Aminomethyltransferase beta-barrel domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|296135946|ref|YP_003643188.1|
Sequence length 314
Comment folate-binding protein YgfZ [Thiomonas intermedia K12]
Sequence
MPLLSCPLDQLSLLRVSGPQGADLLHAQLSQDFQHWPDEQARLAALLNPQGRMLADFIAV
RLAPEQIGLLLDASIAAAALQRLRMFVLRLKCTLDDASAQWARHGLLGDTAADYPASLAP
PAQPWGVRRLESGALLLRLPQAGSAVRCVLLTERDQAAQAALRAELAVLPALPPSEWALQ
DIRAGLPHLTAATQQLFVPQMLNFELIGGVNFKKGCYPGQEVVARSQYRGTLKRRMYVVT
GPAAMQPGQELVHAADPGQPCGVVVNAAADTAGVWWALAELKIALAEQPGLHRGSAEGPE
LKLGALPYALTAPD
Download sequence
Identical sequences D5X162
WP_013123120.1.68284 gi|296135946|ref|YP_003643188.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]