SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|297618036|ref|YP_003703195.1| from Syntrophothermus lipocalidus DSM 12680

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297618036|ref|YP_003703195.1|
Domain Number 1 Region: 126-243
Classification Level Classification E-value
Superfamily OmpA-like 2.88e-32
Family OmpA-like 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|297618036|ref|YP_003703195.1|
Sequence length 258
Comment OmpA/MotB domain-containing protein [Syntrophothermus lipocalidus DSM 12680]
Sequence
MARNSKKEQEGGEGGPSMERWLLTYSDLITLLMIFFVVMYTMSQVDAQKFQALANSLSMV
LSGKSISIMETPGPSVVEGRSGQIIREGQGDTPTLQGNLEAIEKQLAEYIKSEEGLAGNI
VLMEQERGLVISLKDTLLFPKGSDVLTPRAHEIIRKVGESLKTIPNYVRVEGHTDDLPIN
TPKFPSNWELSVLRATNVVHVLAGEVGIPPDRLSATGYGEYRPLMPNDSEPNRAMNRRVD
IVILKQKYDYFEPPQSGE
Download sequence
Identical sequences D7CPJ5
gi|297618036|ref|YP_003703195.1| WP_013176032.1.24510

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]