SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|78062266|ref|YP_372174.1| from Burkholderia lata

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|78062266|ref|YP_372174.1|
Domain Number 1 Region: 97-230
Classification Level Classification E-value
Superfamily Ferredoxin reductase-like, C-terminal NADP-linked domain 6.42e-31
Family Reductases 0.019
Further Details:      
 
Domain Number 2 Region: 223-347
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 1.97e-27
Family 2Fe-2S ferredoxin-related 0.042
Further Details:      
 
Domain Number 3 Region: 4-106
Classification Level Classification E-value
Superfamily Riboflavin synthase domain-like 8.2e-25
Family Ferredoxin reductase FAD-binding domain-like 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|78062266|ref|YP_372174.1|
Sequence length 353
Comment ferredoxin [Burkholderia lata]
Sequence
MSDSRFHRLTVAEVIAESDDACSFVFDVPAALRDAFAYRPGQFLTLNVPCADATVARCYS
LSSAPGIDAAPKITVKRVRDGRASNWLCDRVKAGDALDVLPPAGVFTPRTLDGDLLLFAG
GSGITPVLSILKSALVHGRGMLTLIYANRDERSVIFRAELQQLAQRHPGRVRVIHWLDSV
QGIPQQRHLEELARPFSQQETFICGPALFMENALAAMLGLGLPRARVHVERFASLPDAPA
QAPAASDTTASSVAAAASASGDGAAIETVLDGDAFAFDSAPGETLLDAMLRAGVPAPNSC
RMGQCGACMCRIERGEVALDSNHVLDEDEIAAGWTLACCARPASDALRVVFPD
Download sequence
Identical sequences Q396T1
269483.Bcep18194_B1416 gi|78062266|ref|YP_372174.1| WP_011355020.1.41686

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]