SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSBTAP00000026817 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSBTAP00000026817
Domain Number 1 Region: 2-331
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.61e-60
Family L-arabinose binding protein-like 0.0012
Further Details:      
 
Domain Number 2 Region: 330-436,555-691
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.17e-53
Family Phosphate binding protein-like 0.00000000477
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000026817   Gene: ENSBTAG00000034854   Transcript: ENSBTAT00000026817
Sequence length 797
Comment pep:known chromosome:UMD3.1:1:5745277:5915273:1 gene:ENSBTAG00000034854 transcript:ENSBTAT00000026817 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPNTTLTYDIQKINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHI
QTRWKHPSVDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIK
APSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTE
YYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSAIIEKWSMERLQAPPRPETG
LLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEAQWDG
LTGRITFNKTDGLRKDFDLDIISLKEEGTEKEEPYVMYRKSDKPLYGNDRFEGYCLDLLK
ELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDF
SKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEW
YNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIIS
SYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFM
SSRQQTALVKNSDEGIHRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTP
IGKKEHSKIKIAIILKIQKEKSLHFNQEYWIRGHGRPKSHQQEASGLGTKIIRGVFFLFA
KSLILKSTLSIFFFFYQKGKSSRIEKCLSFNAIMEELGISLKNQKKLKKKSRTKGKSSFT
SILTCHQRRTQRKETMA
Download sequence
Identical sequences F6QCU7
ENSBTAP00000026817

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]