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Domain assignment for ENSBTAP00000004651 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000004651
Domain Number 1 Region: 47-137
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 5.95e-38
Family SCAN domain 0.0000514
Further Details:      
 
Domain Number 2 Region: 354-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.33e-26
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 3 Region: 400-452
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.16e-19
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 4 Region: 316-368
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.5e-18
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 5 Region: 485-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.84e-18
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 6 Region: 215-261
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.000000131
Family KRAB domain (Kruppel-associated box) 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSBTAP00000004651   Gene: ENSBTAG00000003575   Transcript: ENSBTAT00000004651
Sequence length 543
Comment pep:known_by_projection chromosome:UMD3.1:23:30186451:30193866:-1 gene:ENSBTAG00000003575 transcript:ENSBTAT00000004651 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MARESKESAALDAQSAEDRTGILTVKVEKEDASVLAAEARAPGSPAPSPEHSRQRFRGFR
YPEAEGPREALSRLRELCRLWLRPETHSKEQMLELLVLEQFLTILPTDLQSWMREQHPES
GEEVVALLEYLERQPDGPMPQVLGGGQEQELLCCKMAVLTPIQRPQNIQFQPVKALLKRE
SLGSIPDRVLQVPRLAPGGRCREDAVIATRFAPGSQGPFKMEDVALTVSPGWTQLDSSQV
NLYGDKRQENHGSLTSLGGVVQPKIRELPPDEDHPTQEPGQIPCHLGKATGQIPACAEAG
EQEGRLQRKKTAAGNRRHYCHECGKTFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSA
LVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEH
HKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHGNKNLQNPDPGRTWESQGRKESQWENVE
VPVSYKCNECERSFTRNRSLIEHQKIHTGEKPFQCDTCGKGFTRTSYLIQHQRSHVGKKI
LSP
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Identical sequences E1BHH2
XP_002697494.2.76553 XP_005906215.1.15283 XP_010823681.1.59421 ENSBTAP00000004651 9913.ENSBTAP00000004651 ENSBTAP00000004651

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