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Domain assignment for ENSCSAVP00000008310 from Ciona savignyi 76_2.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000008310
Domain Number 1 Region: 3-89
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2e-23
Family La domain 0.00023
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000008310
Domain Number - Region: 76-158
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0239
Family Canonical RBD 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000008310   Gene: ENSCSAVG00000004942   Transcript: ENSCSAVT00000008418
Sequence length 581
Comment pep:known reftig:CSAV2.0:reftig_140:193854:209429:1 gene:ENSCSAVG00000004942 transcript:ENSCSAVT00000008418 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKLTDQLKCQLEYYFSRENLAQDPYLVSQMDNQQFVSIWTVANFNAVKKLTNDISLVIQA
LKASTLVQVDEKCERVRPKPTSYIVILREIAAGTPSEEVEALFQGNKCPEFISCEFAGGT
SWYITFENENKAQQAYRHLREEVVQFCGKPIMARIKSSSNHLNTFSARHQPQKPELTRVE
PSGHHEWMTHPVQPTVVWGLPQNMEVRFPSYHHPNNPPMHHPRMMPPRGHEVVRKSVVGN
TPAHYLPAVNTAPFVMPNANHSLVLVAPQVFGGHVRRVAPPSPHQCSVVQKPMRNGRDTV
IQHHYGMRPRFLHKASKEEARHDMNSARYYPVEHTTVNSNDAMNKEKVFGGCPQHVRPSF
HGRHGHKNAVQPSNIQPTNNTEHRFLGKGRDHKFSGNKNKGLENKEGERREVPFHLKEAG
FPPLPNFTDSDQDFPSLTVDNGADAKDAESSDSLTEQPAEPVSGETCIAPAIPSSRSNLG
DWRPTYADMLRRMEEKQPNVSNLNPGCKPCENPSDNVDQSEDGAPMSGEGINQNGNHVHR
KKSHRENKHNEKAATSKRRSESRSIRNNNTNNNSVIISPDK
Download sequence
Identical sequences H2YSK0
ENSCSAVP00000008310 51511.ENSCSAVP00000008310 ENSCSAVP00000008310

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