SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|29839875|ref|NP_828981.1| from Chlamydophila caviae GPIC

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|29839875|ref|NP_828981.1|
Domain Number 1 Region: 84-177
Classification Level Classification E-value
Superfamily Ribosomal protein L6 2.09e-33
Family Ribosomal protein L6 0.0000674
Further Details:      
 
Domain Number 2 Region: 1-83
Classification Level Classification E-value
Superfamily Ribosomal protein L6 7.98e-18
Family Ribosomal protein L6 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|29839875|ref|NP_828981.1|
Sequence length 183
Comment 50S ribosomal protein L6 [Chlamydophila caviae GPIC]
Sequence
MSRKARDPIVLPQGVEVSIQNNEILVKGPKGSLKQVLAPEVVVDIKDREVFVHAAPHVVD
RPSRMQGLFWALISNMVQGVNTGFEKRLEMIGVGFRAAVQGSVLDLSIGVSHPTKMPIPA
ELQVSVEKNTLISVKGINKQLVGEFAASIRAKRRPEPYKGKGIRYENEYVRRKAGKAAKT
GKK
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Identical sequences Q824N7
gi|29839875|ref|NP_828981.1| WP_011006080.1.7641 227941.CCA00107

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