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Domain assignment for gi|302338534|ref|YP_003803740.1| from Spirochaeta smaragdinae DSM 11293

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302338534|ref|YP_003803740.1|
Domain Number 1 Region: 262-562
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.44e-74
Family DNA repair protein MutS, domain III 0.0000047
Further Details:      
 
Domain Number 2 Region: 564-793
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.25e-57
Family ABC transporter ATPase domain-like 0.000000908
Further Details:      
 
Domain Number 3 Region: 100-260
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 1.57e-37
Family DNA repair protein MutS, domain II 0.00026
Further Details:      
 
Domain Number 4 Region: 1-101
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 2.62e-33
Family DNA repair protein MutS, domain I 0.0000648
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|302338534|ref|YP_003803740.1|
Sequence length 855
Comment DNA mismatch repair protein MutS [Spirochaeta smaragdinae DSM 11293]
Sequence
MMQQYRSLKERHRDAVLFFRLGDFYEMFERDAAEVSAILGLTLTKRNGLPMCGIPYHAAG
TYIPRLLWAGRKIAICEQIALPQGGKGIAKREVVEVITPGTVVDEDFLDRGRNNYLASLG
QIEGALSFSYIDLSTGEFAATLLGKENRFEKLRKELARLQPSELLVQESLLEEGPETVRI
LEERQILINRYPDWSYDLGDSEARLRRLFGVTNLKGFGILPDDHAIYACGTLLEYLSETA
HDHLRHISSIVRYEESDFVGLDESTQRNLEIVSNMRDASNAYTLFQVLDKTRTAPGARTL
RSRLLHPLRDMKAITLRLDKVEELYRNQMILSALRKKLSGVLDLERLSARIALGKAHAKD
LAAVASTITVILEIEQEFGEMRVPGSWMLAQENRSAAEELEKELRRAICDDPSVLLTEGN
MIREGYSEELDRLRLLKRDSRKVLADYLEDEKNRSGIANLKIKYNKIIGHFIEVTKANLS
LVPDHFIRRQSLVGAERFTTERLGELETELNSASEKMIQLEKELFLSLRESCARRLPVLH
TLAEYICDIDFFQALAYAATVHGYVRPDINTGNDIAIREGRHPVVEAGLNAGEFIPNSID
IGAKKSFALITGPNMAGKSTYLRQTALIVLMAQCGSFVPAMEATIGIVDRIFCRVGASDN
LARGESTFLVEMNETAYILRTASEKSLVIMDEVGRGTSTTDGLAIAWAVSEALIERKTKT
LFATHFHELTELQHDSIQKLRLMVKEEGDRVIFLKKVEEGCAAGSYGIHVASLAGVPDPV
LSRARQILGELEHRDRPIPKDMVPQRKSQKSDLLFNENDLIESEIMSIDLDSLTPKKALD
ILYRWKEELGSGRMK
Download sequence
Identical sequences E1R1K5
gi|302338534|ref|YP_003803740.1|

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