SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|397772880|ref|YP_006540426.1| from Natrinema sp. J7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|397772880|ref|YP_006540426.1|
Domain Number 1 Region: 2-181
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.73e-38
Family GHMP Kinase, N-terminal domain 0.00039
Further Details:      
 
Domain Number 2 Region: 187-303
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 1.97e-29
Family Mevalonate kinase 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|397772880|ref|YP_006540426.1|
Sequence length 328
Comment mevalonate kinase [Natrinema sp. J7-2]
Sequence
MTLSSAPGKVYLLGEHAVVYGEPTVLCAIEQRARVGVQRRDDGKLRVNAEDLSLNGFTVE
YDGTADEGPDIDVSESLLDAAMGYVDGAIEQVRDVTGNDEVGFDVTIESDIPLGAGLGSS
AAVVVAAIDAATRELGVTLETDELAERAYRTEYQVQNGQASRADTFCSATGGAVRVEGDD
CRSLAAPDLPIVIGFDGGAGDTGQLVAGVRTLRDEYGFAADTIEAIGDVVRNGEAALADG
DLEELGRLMNFNHGLLSALGVSSRSLDTMVWAARDAGAYGAKLIGAGGGGCIAALDPTPE
TETALSFTPGCEDAFRAELAETGVKRLE
Download sequence
Identical sequences I7BU15
gi|397772880|ref|YP_006540426.1| WP_014863389.1.60908 WP_014863389.1.66429

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]