SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|302035663|ref|YP_003795985.1| from Candidatus Nitrospira defluvii

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|302035663|ref|YP_003795985.1|
Domain Number 1 Region: 29-222
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.23e-59
Family Extended AAA-ATPase domain 0.00000285
Further Details:      
 
Domain Number 2 Region: 244-363
Classification Level Classification E-value
Superfamily post-AAA+ oligomerization domain-like 1.19e-17
Family MgsA/YrvN C-terminal domain-like 0.078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|302035663|ref|YP_003795985.1|
Sequence length 625
Comment DNA polymerase III subunit gamma/tau [Candidatus Nitrospira defluvii]
Sequence
MDYQVSARKYRPGTFDDVIGQSHVVQTLMNSIATKRIAHAFLFSGTRGVGKTTVARILAK
ALNCEQGPTGTPCNTCANCREITQGTSVDVVEIDGASNTSVDDVREIRENVKFTPFRGQY
RVYIIDEVHMLSNSAFNALLKTLEEPPSHVVFIFATTEIHKIPATILSRCQHYNFRRISK
AEIVQRLRHVADQDGLTIEDRSLMALARASEGSMRDGLSLLDQIIAFGGNTIRHEDLETL
LGAVPQERIRAMVEAVIQQDSAKALQVIAALLDQGHDVRAYCADLVEYVRNMLVAAVVPS
GPELRSLIEATEEDLTQLARDAERFTVEQLQELFRMYAAAEDSLRVSAHPRFVLETAAVR
ATRLLRTAEGQPASGGLSVQPNKPAADRRVVTQTSAQSQDKAVPSPAPVVKTTGVKVSQD
NVAKTSPAGGSAPKAPSVAPPREVAAPPARTPAVAPPAPALVPASTAPVQQEPKATSAAE
ASASAVEVNWEQFQEAVSTNHPNIAPFLEMGRLVKIEGGLITLGFAKQATTARSMLEKED
NLQALAALGEGLYGCAVRIRIVEVAEQDPGAAPTMKQIRVAKEQEQRLILTQQAKAHPLV
KQALEMFGGELAEVRTTAPAQEVQE
Download sequence
Identical sequences D8P9Z9
WP_013246885.1.3676 gi|302035663|ref|YP_003795985.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]