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Domain assignment for gi|302036668|ref|YP_003796990.1| from Candidatus Nitrospira defluvii

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302036668|ref|YP_003796990.1|
Domain Number 1 Region: 126-273
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.14e-60
Family C-terminal domain of ribosomal protein L2 0.00000123
Further Details:      
 
Domain Number 2 Region: 2-124
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.23e-45
Family Cold shock DNA-binding domain-like 0.00000616
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|302036668|ref|YP_003796990.1|
Sequence length 275
Comment 50S ribosomal protein L2 [Candidatus Nitrospira defluvii]
Sequence
MALKVYKPTTPGRRGMTAIQGEKLTKKKPEKALTGFHLRTGGRNNDGRQTIRFRGGGHKR
LYRQIDFRRDKAGIPAKVASIEYDPNRSSRIALLHYVDGEKRYILAPVGLSINDVVQSGV
GAEVRPGNALPLVNIPLGTTIHNIELKPGKGGQLIRSAGGSAQVMGRDGAYVQIRLKSGE
MRKVLSTCMATVGQVGNVDHENVVVGKAGRTRWKGKRPHVRGVVMNPVDHPHGGGEGKSG
QGNPHPVSPWGTPAKGYKTRKNKATDKFIISRRKK
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Identical sequences D8PCV5
WP_013247889.1.3676 gi|302036668|ref|YP_003796990.1|

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