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Domain assignment for gi|302038436|ref|YP_003798758.1| from Candidatus Nitrospira defluvii

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302038436|ref|YP_003798758.1|
Domain Number 1 Region: 8-25,57-469
Classification Level Classification E-value
Superfamily Outer membrane efflux proteins (OEP) 1.22e-49
Family Outer membrane efflux proteins (OEP) 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|302038436|ref|YP_003798758.1|
Sequence length 514
Comment putative outer membrane efflux protein [Candidatus Nitrospira defluvii]
Sequence
MKTMANEPLKVLAWVGAMVMTSGCMIKPYVLTDEDVRTRAANDLQMVSTLREPLSGPIDL
YEAIARALKFNLDAKVKAMQAQLAHQQLNVAHYTLLPQLSANAGFDGRNSYSGGGAQSLV
DGRPVLEPFTSSDKNVVSGNLALSWDVLDFGLSYVRAQQAADNVMIAEEERRRIAVRLVQ
DVRSAYWRAVSAERVLYRVKFLDESVNKALERAQQIVDKKLQTPLTPLNYRRDLLNIQRE
VQRLYRELSTARVQLASMMGLPPGTEYDLAVPQRASTVPVVDPDTGRMEEQALLLRAELR
SLDYQKRINAKEARAVFLEMFPNLKLSVGGYYSSNSFFLYQNWLGYASQLSWNLLSAFRV
PAKLKAVEAHRQVLDAQSLALTMTILTEVHVGALQFAQASQEYLNARSYHETQLAITDHT
KNLWLTKSTNDLTFIRERVNDVLAEVRMDSAQSGVESAYATLMASLGEDAAPTGTDGQSV
AALADELRKQRAPAVDTVSEPGRRLESHAIPLAN
Download sequence
Identical sequences D8PHU6
gi|302038436|ref|YP_003798758.1|

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