SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|386347199|ref|YP_006045448.1| from Spirochaeta thermophila DSM 6578

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|386347199|ref|YP_006045448.1|
Domain Number 1 Region: 601-633,666-762
Classification Level Classification E-value
Superfamily TPR-like 0.0000194
Family Tetratricopeptide repeat (TPR) 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|386347199|ref|YP_006045448.1|
Sequence length 926
Comment hypothetical protein [Spirochaeta thermophila DSM 6578]
Sequence
MFLSIYLYHGKMARRIGRRPVLEFYDELRRRLVEVWPGCEFVEHGDLWRLSLPPQHSRED
VLALLSSLFALKEFVEDRSHLHHGVAFLLEDGGSGGGRTHEEIPLGGGCLWSTEGVYRLL
VRHVRAKREEDLWLLTELRGYTPSSVEFPFSRMPLSRGQCRAFGRCLHILRRGGVCHLRA
HPADLLDWTLVWRLEGRGWTVLPQSFHSGRMLAAESLLSGLLRLLLSRVEEDDFPKGYVG
EMLRRVRYEDILVDIPLRALYHACTHLMDLLRRRGRKVVVLVASEGGEEEEPILVRLLEW
SRERGIGWVWVSSTSPPAWLKDRAVSVVAPGLTPGDRERFFRERGVDPLRGAGKWHRFEL
YARNLVREDEGTGPLESFLMGLSPKERRLLLLHELCFPVLGEERIKDWASRWDITPLEVE
EMRSWLQEYGVLYPGSPSSPRYAGVSSSGDEVREMVAHLSMELRRLGHSVPWFWFPHLQG
GERDSFVWNLYRGWLRGDSMVRDAREGGPLSTRLREEERRGLLLLSRMMYALEEEERGEG
DRVVTLYEKETSLSSPFREFLDLHVVRYLRGTDPPRALALVKDLIFRLQNGRPSSFLRIV
AYLELTLAIAARGTLRDAEEYLHLAVHLGEKDQATGLLASLVESTLWWLEGSYTRTLLSL
TTALDGAVGIDLPEVRAALGFVLGRTHVEFGEYEKALEVFDATHGYFQSVLSSRALRVFK
KWKARCLFFLDRPEEADRILRELPEDEEARLFRIEAAARAGDTRRIMELLSLPPEDVRKY
PEVKEDLLPWWYTGFGLIEERVFYQQPRERVPRMLTRVLELYARGMEGDMSAVEAFSEII
RHAHLRKGDPYTHLYHLWYGEILLDLERRGLSYQQDHPLTILGKGVKLLQVRASRIENAT
QKRHYLYRNYWNGRLMELARRHKLVY
Download sequence
Identical sequences G0GA43
gi|386347199|ref|YP_006045448.1| WP_014625064.1.62259

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]