SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|296109871|ref|YP_003616820.1| from methanocaldococcus infernus ME

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|296109871|ref|YP_003616820.1|
Domain Number 1 Region: 157-286
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 8.64e-39
Family Homoserine kinase 0.00000952
Further Details:      
 
Domain Number 2 Region: 1-153
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.58e-32
Family GHMP Kinase, N-terminal domain 0.00000163
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|296109871|ref|YP_003616820.1|
Sequence length 290
Comment homoserine kinase [methanocaldococcus infernus ME]
Sequence
MKVKAPCSSANLGVGFDVFGLCLEEPYDIIEVKKIDEGIEIEGKDIPLNPKENVAGVVAE
KMLKDFNIESGVKIKIKKGIKGGSGLGSSAASAAGTAFAINELFNLKLSKLKLVDYASYG
ELIASGAKHADNVAPAIYGGFTIVNYNPLNVLHIDVDFNVIVAIPNVKIETKKAREIIPK
EVSLKDMVHNLGRATGMIYALFNNDLELFGKYMMEDKIVEPYRGKLIPHYFEVKEKLKNL
AYGVCISGSGPSILVIPKEEFQDEIIDILSSYYDKIIKTRVGKGCELYKA
Download sequence
Identical sequences D5VTF3
WP_013100601.1.24528 gi|296109871|ref|YP_003616820.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]