SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|16330947|ref|NP_441675.1| from Synechocystis sp. PCC 6803

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|16330947|ref|NP_441675.1|
Domain Number 1 Region: 111-270
Classification Level Classification E-value
Superfamily alpha/beta knot 1.77e-44
Family SpoU-like RNA 2'-O ribose methyltransferase 0.00027
Further Details:      
Domain Number 2 Region: 11-108
Classification Level Classification E-value
Superfamily L30e-like 1.15e-22
Family RNA 2'-O ribose methyltransferase substrate binding domain 0.0048
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|16330947|ref|NP_441675.1|
Sequence length 274
Comment rRNA methylase [Synechocystis sp. PCC 6803]
Download sequence
Identical sequences P74261
gi|383325858|ref|YP_005386711.1| gi|16330947|ref|NP_441675.1| gi|16330947|ref|NP_441675.1| gi|383491742|ref|YP_005409418.1| gi|383322689|ref|YP_005383542.1| 1148.slr1673 WP_010872975.1.11876 WP_010872975.1.1889 WP_010872975.1.18904 WP_010872975.1.33690 WP_010872975.1.35395 WP_010872975.1.47586 WP_010872975.1.99424

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]