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Domain assignment for MDP0000140430|PACid:22622131 from Malus domestica v196

Domain architecture


Domain assignment details

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Strong hits

Sequence:  MDP0000140430|PACid:22622131
Domain Number 1 Region: 171-418
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.69e-32
Family Extended AAA-ATPase domain 0.088
Further Details:      
 
Domain Number 2 Region: 567-783
Classification Level Classification E-value
Superfamily RNI-like 5.49e-25
Family 28-residue LRR 0.071
Further Details:      
 
Weak hits

Sequence:  MDP0000140430|PACid:22622131
Domain Number - Region: 89-119
Classification Level Classification E-value
Superfamily Flavivirus capsid protein C 0.0968
Family Flavivirus capsid protein C 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MDP0000140430|PACid:22622131
Sequence length 834
Sequence
MGGVGEIFAGAAVGALFSVLYDVVKDVKDKTMMFRELLGDLDSTLEALNPLIKDIERYKK
VLDQSNKEVLKIVRQIADGEGLVLKCSKLSRWKSFKKYKYAKQLLDLDKCLNRLLKILNV
EGIRNGFENLHISRENLAVSKEALAAVQKNGLVGNKENVVIQKQEGFHDLGSVPEPPRVT
VGLDEPLRDLKIMLLKDDVSMLVLTAAGGCGKTTLAMKFCQDEDVKVCLTGYMINSXKNI
FFVTVSKDPNLDVVQELYQRMKSQETGXNPLLLVLDDVWLKSKSLLQKFDELELPNYKIL
VTSRSEFPGFGTPYNLKALNDEDSMTLLRHSASLGDSLSVPEDLLRKILKHCKGVPLAIT
VTGKSLRGQATEFWRSRLTEWSKSSILDSETELLLRLQSSIDDLEEKEAVIKECFMDLGS
FPEDQRIPAAAFIDMWIELYKLDDDFLCIKNLLELTTRGLANLVITRKENIEIVDDYYIE
HFVSQHDMLRQLAIYNAKLDPIEDRKRLIVVSGHNQPKWLTEQKSQPINARLLSISSGCP
ISLCRKCIYEHICTYGMFSGEWQSVHVPQVEVLVLNFKTENNALPEFVEKIGNLKVLIVT
NYGFLPTGLNNFXLLGSLSNLKRIRLERISVPSITKNFVPLKSLKKISLFMCNIGQAFCN
CSIKISDAWPSLEEMNIDYCHDLVSLPAELCDFVYLKKLSITNCHKLSALPDXIEKLENL
EVLRLRSCTDLVSLPGSIEKLNKLYFLDIYNCISIKELPENIGEMSGLRKINMGQCSRLE
ELPLSVWDLDQQLEEVICDAGTEYLWKPFLASFRDKIKVAKEKTNLNWLEKPQL
Download sequence
Identical sequences MDP0000140430|PACid:22622131 MDP0000140430

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