SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MDP0000292756|PACid:22636404 from Malus domestica v196

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000292756|PACid:22636404
Domain Number 1 Region: 302-624
Classification Level Classification E-value
Superfamily RNI-like 1.1e-64
Family Cyclin A/CDK2-associated p19, Skp2 0.027
Further Details:      
 
Domain Number 2 Region: 56-405
Classification Level Classification E-value
Superfamily L domain-like 5.78e-64
Family Polygalacturonase inhibiting protein PGIP 0.011
Further Details:      
 
Domain Number 3 Region: 717-1031
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.03e-62
Family Protein kinases, catalytic subunit 0.00041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MDP0000292756|PACid:22636404
Sequence length 1049
Sequence
MMRFSAYCDKVCFLACLILSLQLNSSQKTVFASANSTEAEALLKWKASFQNQTENNLTSW
MNANEAPCNTWIGVSCNSAGSVNRLNLTNSGIQGTLLEFPFMSLPNLAYVDLSYNELFDQ
IPPEISSLTKLIYFDVSYNQMSGKIPPEISLLTNLQVLHLNANKFNGSIPQEIGQLKFVY
ELALNYNNLEGSIPASMGNLSQLSSLTLSGNQLSGSIPPAIGNLSNLVELYLFDNYLSSP
IPQSFGNLKNLTMVFLYNNTLSGSIPTSLGNLTNLVYLSLYDNKLSGTIPEEIGNLKFVV
TLDLARNQLNGTIPSSFGNLSSLENLYLRGNQLSGSIPQEMENLMKLTLLDLGTNRFSGY
LPRDICRGGLLQKFTAEKNEFTGPIPKSLKDCKSLVRVRLEGNQFTSNNISEDFGVYPNL
QFVDLSHNNLHGEISHIWGQCPNLTTLRIAGNKLTGSIPSEIVNANKIQELDFSANHLVG
VVPKDLGRLTSMLNLKLNGNQLSGSIPSEFGAFTELEHLDVSTNKLNGSIPSIVGELVRL
NYLNLSNNNFSQEIPFQLGKLFHLSQLDLSRNLLGGKIPSEISNMQSLEWLNLSHNNLSG
LIPATFDGMRGLLYIDVSYNRLQGPIPNNKAFQDGHSFEGNEGLCGNVVGLQSCNKHVSK
RKNNRKLVFAIVFPILGVVLLAFLAIFFIGTRRKKEPETEKSDIHDEVFSISHFDGKKLY
WEIICATNAFDSKFCIGKGGSGSVYMAKLPSGSIVAVKKLHQKLDSVETSQKEFHNEISA
LINTRHRNIVKLCGFCSNSQHSFLVYEYLEKGSLASILSKEDEAKELDWSRRVRIVQGVA
HALSYMHHDCVPPIVHRDISSSNILLDYDYEPCVSDFGTAKLLNPDSSHWSSLAGTLGYV
APGKVKQLKHIMLNLIIYKVKHGNGLLSLNLYAELAYTMKVTEKCDVYSFGVLALEVITG
KRLGDLISSFSSPSACENKLLKDVLDQRLPPPTPEVANELTTIXRVAIACRHSQPQSRPT
MHMVSQSLSFQTAASNGGPIITLEELIKI
Download sequence
Identical sequences MDP0000292756|PACid:22636404 MDP0000292756

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]