SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for MDP0000304769|PACid:22644689 from Malus domestica v196

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000304769|PACid:22644689
Domain Number 1 Region: 293-392
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-20
Family B3 DNA binding domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MDP0000304769|PACid:22644689
Sequence length 583
Sequence
MEFPSQCDYHSYSVANSDGLKSSFDSRLVIEEMTSKQDMESNREVEVVQWTTKMKTQVPL
SSSGEALICNVGLQSVSYGVCGTCRTTRCGVRLQREEIIPGDSSPFTSSFYNVHKLTLTG
QSTSTSCSWDAGFRERQGVSLESKRGKRARKCGLAEGNDCMCPSATQYRYYPYHQAGLPM
YPFLGGAQPNMVLSREQASLDRSGWILNALMSKSARNERKMARQRSLNLSRNAANTAVSC
SPPVSRHPPFHGNHDDDTCGIISTSSSGNGADLQNTKEQLYPFCTPDNKKLRPLFNKELK
NSDVGPLGRIIVPKKEAENNLPMLSGKEGIQLTVRDVHSDQHWEFKYKYWSNNRSRMYVF
EYTGAFVRQKRLEAGDCIYLYEDECKNIYVYVEKVPRPARVAEPSSSSQQRNTTTNHTDQ
TANMNTSLEANNTDNKTPNTDAKTHRSNPYVASNLSSPSPSPSPFTYVAGYEEDELSLEL
LMEQLKQEQEANVFADAVSMTSASSSAYMEHEEATTLSNNIANRHIEISTKPPSTLSAGI
DPSSSSSSQSRAMVRMVNDDQPEFDDCYKGLGTLPEVDHYKYV
Download sequence
Identical sequences MDP0000304769 MDP0000304769|PACid:22644689

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]