SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MDP0000950533|PACid:22620405 from Malus domestica v196

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000950533|PACid:22620405
Domain Number 1 Region: 752-1043
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 7.55e-79
Family Protein kinases, catalytic subunit 0.00015
Further Details:      
 
Domain Number 2 Region: 209-529
Classification Level Classification E-value
Superfamily RNI-like 5.26e-56
Family Cyclin A/CDK2-associated p19, Skp2 0.026
Further Details:      
 
Domain Number 3 Region: 58-267
Classification Level Classification E-value
Superfamily L domain-like 1.36e-32
Family Polygalacturonase inhibiting protein PGIP 0.0074
Further Details:      
 
Domain Number 4 Region: 467-665
Classification Level Classification E-value
Superfamily L domain-like 4.25e-29
Family Polygalacturonase inhibiting protein PGIP 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MDP0000950533|PACid:22620405
Sequence length 1053
Sequence
MEVLGFTPMAFLKWVLLACCIGSVFGLNSPTQSCYPNDFLALREFAGNLTNGSMITAWHN
TSTCCQWDGVVCGNVNNGTVVASRVTQLILPSMSLSGTISRSLGRLDQLKLLNLSLNHLE
GGLPAELSDLKHLEVLDLSNNMLSGPVSGALSGLNSIRVLNISSNSIHDDLSELGGGFSH
LVVFNISNNSFTGQFNPRICSSSNETHILDMSWNRLVGSLEGLDNCSRSLQQLHLDFNSF
SGYLPESLYTYSALEQLSVSGNSLSGQISKELSKLSSLKTLVISSNQFLGELPNVFGNLR
RLEQLVAHSNMLSGPLASTLALCSNLRVLDLRNNSLSGSIDLNFTGLPKLCTLDLATNHF
SGFLPNSLSNCRELKTLSLARNKLRGSIPEDFAKLTSLFFLSLSNNSFVNLSETLSVLQQ
CKNLTTLILSKNFFGEEIPKNASGFESLMVLALGNCALKGQIPVWLLSCRKLQVLDLSWN
RLDGPIPLWIGQMENLFYLDFSNNSLSGEIPKSMTELKSLISTNCTHANLIASAGIPLFV
KRNRSATGLQYNQVSNFPPSILLSNNRINGAMWPEIGRLKQLHVLDWSRNNISGTIPSSI
SEMENLEALDLSFNDLYGSIPPSLSKLTFLSKFSVANNHLHGVIPNGGQFLSFPSSSFDG
NSGLCGAMYTPCGDISSTSLKPVTPSSSNSRFGRNSILCVVISIGVGVALLLAVGLLKMS
RRGAKDQIDDFDEDSRPHRISGALASSKLVLFQNSDCKDFTVSDLLKSTNNFNQANIIGC
GGYGLVYKANLPNGAKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND
RLLIYSYMENGSLDYWLHESVDGVSLLKWDVRLKIAQGAARGLAYLHKGCQPNIVHRDIK
TSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSF
GVVLLELLTGRRPVEVCRGKNCRDLVSWMFQMRFEKRDEEIIDSSIWNKNHEKQLLDVLG
VACKCLDPNPRQRPFIEEVVSCLDGIGFESGKQ
Download sequence
Identical sequences XP_008349995.1.92800 XP_008349996.1.92800 XP_017181757.1.92800 MDP0000950533|PACid:22620405 MDP0000950533

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]