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Domain assignment for jgi|Chlre4|325391|pg.chromosome_3_#_146 from Chlamydomonas reinhardtii 4.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Chlre4|325391|pg.chromosome_3_#_146
Domain Number 1 Region: 337-399,428-496
Classification Level Classification E-value
Superfamily TPR-like 0.0000000000000905
Family Tetratricopeptide repeat (TPR) 0.0043
Further Details:      
 
Weak hits

Sequence:  jgi|Chlre4|325391|pg.chromosome_3_#_146
Domain Number - Region: 98-160
Classification Level Classification E-value
Superfamily ARM repeat 0.000633
Family Armadillo repeat 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Chlre4|325391|pg.chromosome_3_#_146
Sequence length 555
Sequence
METPGDQATAAEAEVVDLDFEKFLSVALAETPPDIADQLRAGLRKRYDKPPVEALELCLG
RNVPLARARQLLFHPGEDDMRVYPDLIAMPPAGAPDSHPQRVVQVCSLASLYLVHSKSWE
TVRPFVEAGGLKQLALVLAHPNPYLASQAMSALMHITDEDLLFPWHDPPATPDGRGPRSG
PYALVWRRMYELSSSSPFLAHLLAHYRPGAEPVFPGASGMALRLFAFYVSWMRRHFTQDG
KLSLSSGILELLQHWAGDKVVSEDERQLANQLYQDFSRFPSAKATKPSESDAGASGTRPL
QPQQQHHLGGLDGGDDEEPEHHVAAEASHINSGPSADNEAEQLKERGNEAYKRGDFSAAI
HLYSSALDVLVPTERLLTEGPRRATYHANRAAAYMARAGAQLREGDADTAGHLEGVDHGS
EGLGARHLEAAVLDCDMALQLDPTSGTAPKTCLRKARALQRLARAEEAAVAARTGLDKCA
GGSEVQRELRALVKELEERVGSAPAETQAGRDGGKEAVLGEEQQGNAAVRYAGESGAPAA
SPSAGEGPTNWNDMD
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Identical sequences A0A2K3DW61
jgi|Chlre4|325391|pg.chromosome_3_#_146 3055.JGI325391

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