SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|94972087|ref|YP_594127.1| from Deinococcus geothermalis DSM 11300

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|94972087|ref|YP_594127.1|
Domain Number 1 Region: 111-283
Classification Level Classification E-value
Superfamily SIS domain 2.38e-30
Family mono-SIS domain 0.012
Further Details:      
 
Domain Number 2 Region: 18-91
Classification Level Classification E-value
Superfamily Homeodomain-like 1.2e-17
Family RpiR-like 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|94972087|ref|YP_594127.1|
Sequence length 286
Comment RpiR family transcriptional regulator [Deinococcus geothermalis DSM 11300]
Sequence
MPLNQLLPERRASARPPSALARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATA
GVVESAVTRLCRRLGFSGFHAFKIALSGDVSQAQGAAEATDPFSVAARQAVQAIEGTRQV
ADPAALERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAAT
QSPRGVVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESP
LAGGALSSLVSQVLLVEALYLVLLPLLPGADAFLRETAESVVEKKY
Download sequence
Identical sequences Q1J381
319795.Dgeo_2619 gi|94972087|ref|YP_594127.1|NC_008010 WP_011525947.1.71355 gi|94972087|ref|YP_594127.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]