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Domain assignment for gi|296271800|ref|YP_003654431.1| from Arcobacter nitrofigilis DSM 7299

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|296271800|ref|YP_003654431.1|
Domain Number 1 Region: 1-378
Classification Level Classification E-value
Superfamily Homocysteine S-methyltransferase 2.35e-99
Family Homocysteine S-methyltransferase 0.0000118
Further Details:      
 
Domain Number 2 Region: 336-599
Classification Level Classification E-value
Superfamily Dihydropteroate synthetase-like 7.59e-75
Family Methyltetrahydrofolate-utiluzing methyltransferases 0.00023
Further Details:      
 
Domain Number 3 Region: 866-1157
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 4.58e-66
Family Methionine synthase SAM-binding domain 0.0036
Further Details:      
 
Domain Number 4 Region: 713-845
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 2.49e-36
Family Cobalamin (vitamin B12)-binding domain 0.00016
Further Details:      
 
Domain Number 5 Region: 625-709
Classification Level Classification E-value
Superfamily Methionine synthase domain 1.44e-19
Family Methionine synthase domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|296271800|ref|YP_003654431.1|
Sequence length 1157
Comment methionine synthase [Arcobacter nitrofigilis DSM 7299]
Sequence
MKNRINEIIQNKVLIIDGAMGTQLQNAEIKPEAWKYENQDLEGCNELLNETAPEILEGIH
DAYAKAGANLISTNTFGTMPWVLDEYGISSKAYELSKLGAELVKKSCKKYETEDEPRFCL
GSIGPGTKLPSLGHIRYDEMYEGYKEVANGLADGGCDIYLLETCQDPLQIKAALHALTDT
HPEIPVMVSVTIELSGTMLIGTDAMTIAAIMSPFNILSLGFNCGTGPKQVHKHVKTLSEV
CKFPISVHANAGLPQNKGGVSYYPMGPEEFTQLQSSFLEINGVSFLGGCCGTTPEHIEAL
ANKVRGIKPKAPSGFLKASLASLFNTVPLKQDPAPLLIGERSNATGSKAFRDLLKDNNYE
GTLSVGQQQVRAGAHIIDVSVGFAGRDETGDMDKVVELYSQKVSLPLMPDSTQIKALEAA
LKQIGGRCIINSVNLEDGEEKFDAVCKLAKKFGAALVCLVIDEVGMAKTKEDKIRIAERI
YDLCVNRHGFNPEDLVFDMLTFTIGSGDDEYRTAGVETMEAIREFQILHPEVGTTLGLSN
ISFGLDIKARVYLNSIYLDHCVKAGLTSAIVNVKHILPLNKITEEDRKACDDLIFNNQED
GDPLFKFIDHFSNVEAQEDQSDEEYLKMEPIDKVKKLLLDGDKDRLLPLVDELRHTIKAE
MIVNEWLIDGMKIIGELFGSGQMQLPFVLQSAETMKATVDALNPYLPKEEKASETVLVIG
TVKGDVHDVGKNLVDIILSNNGFKVINIGIKADINDFIIAVQKHKAQAIGMSGLLVKSTA
VMKENLEELKRQGIDIPVLLGGAALTKSFVNEYCRPLYEGPIFYCRDAFDGVVSMQRIES
GDSFNTKLAADLIKDADDIKKEKKEVIIPPYEEIELPPKAEFTFPPLWGRVTQNKTLLNK
DLIFSWINHRVLFRQRWGYKKGAMKADEFLAHEEDVVKPLYEKYKEEFFEKDIFDPIAIY
GYYPCISHDNKLYIFDNEYAFNSLKEAQNVPPLEKAIKVFEFPRQTKAPYRCIADFFAND
RLDVVAFTLASSGLKITSYESELYQNSEFSKYHQIHGLGVELAEALAEVIHKQIRLDLDI
VPKEGHTLYDVQMKQYVGCRYSPGYAACPDLEQSRDIFDLLKPEEFGITLSETFQIDPEQ
STCAIVVPHNKANYYNI
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Identical sequences D5V4W3
WP_013134070.1.41079 gi|296271800|ref|YP_003654431.1|

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