SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|300716776|ref|YP_003741579.1| from Erwinia billingiae Eb661

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|300716776|ref|YP_003741579.1|
Domain Number 1 Region: 64-315
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.36e-42
Family L-arabinose binding protein-like 0.00043
Further Details:      
 
Domain Number 2 Region: 9-65
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 5.3e-16
Family GalR/LacI-like bacterial regulator 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|300716776|ref|YP_003741579.1|
Sequence length 344
Comment LacI family transcriptional regulator [Erwinia billingiae Eb661]
Sequence
MSQGKTGINAYDVAQRAGVSRSAVSRTFTPGASVSESTRNRVMKAAEELGYHVNHLARSL
VSNRSGIVCLIVSDVATPYRASLVSWLTHFLQEAGKVAMIINTDLSDNSVSAALQQAINF
RADASIILSGMPDSGITQLCYQHGQHLILINRDESLPGSLSINLDSRKAADTAISAFVRA
GCRHLAFANSLAGTPSLMKRETDFLAAAERAGLTVDVERFGTTSYESGQILAHRLLTRQK
RPDAVFCVTDLVACGFMDEARTRFSLRIPEDLCIVGYDNIAQSGWSSYNLTTFAPPMETF
SREAVQWLVAQEKSSHELDPRVDRPSDKCLYEASVVWRGSVRGG
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Identical sequences D8MSC5
WP_013202219.1.56564 gi|300716776|ref|YP_003741579.1|

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