SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|300716341|ref|YP_003741144.1| from Erwinia billingiae Eb661

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|300716341|ref|YP_003741144.1|
Domain Number 1 Region: 17-261
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.64e-31
Family L-arabinose binding protein-like 0.00038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|300716341|ref|YP_003741144.1|
Sequence length 297
Comment LacI family transcriptional regulator [Erwinia billingiae Eb661]
Sequence
MTDKPQQQQKSGQRAGVIGVVIEGFNNPWTLKMLDEVTRQLDLRGYLPLLLNARSADRTP
SLMQKAAGLEPVGLVFLTADGTAQSVAGDLLPGVPVVQLGGASEGEDTVVAAGGYEAGVE
SGKLLLSQGYQRFGFMQGKDRASTPLRQMAGFVDSLTAADKRLDRVLIAGNNDRELAWQA
MTAYLKQTRASERINALLCENDLLAFGAIQAIRDFGQGVHIGVVGFNDSDDAGSSTWHLT
SWAPRSDLLVTEALNRLLDKRADLSGQWQQGQLQVRHSHLGKEVLGDIPKCGCASRH
Download sequence
Identical sequences D8MR36
WP_013201786.1.56564 gi|300716341|ref|YP_003741144.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]