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Domain assignment for gi|298492518|ref|YP_003722695.1| from 'Nostoc azollae' 0708

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|298492518|ref|YP_003722695.1|
Domain Number 1 Region: 4-251
Classification Level Classification E-value
Superfamily PHP domain-like 3.73e-35
Family PHP domain 0.0099
Further Details:      
 
Domain Number 2 Region: 775-865
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 8.83e-17
Family Intein (protein splicing domain) 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|298492518|ref|YP_003722695.1|
Sequence length 877
Comment DNA polymerase III subunit alpha ['Nostoc azollae' 0708]
Sequence
MSFVPLHIHSDYSLLDGASQLPELVDQAITLGMKAIALTDHGVMYGAVELIKVCRSKNIK
PIIGNEMYIINGDIEKQERRPKYHQVVLAKNTKGYRNLVKLTTISHLQGVQGKGIFSRPC
INKNSLKEYKEGLIVTSACLGGEIPQAILSKRPDAARKVAKWYKEVFGEDFYLEIQDHGS
QEDRIVNVEIVKIARELGIKFIATNDSHYISCFDVEAHDALLCIQTGQLISEDKRMRYSG
TEYLKSAQEMQQLFRDHLPDYVIAEAIATTEEVGDKIEPYHIMDEPKIPTPPIPSGHTPD
TYAEEIAWQGLLERLNRKSRSEVDQIYKERLEYELKMLQRMGFSTYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEKRDQV
IEYVTNKYGADRVAQIITFNRLTSKAVLKDVARVLDIPYGEADKMAKMIPVVRGKPTKLK
VMVSNETPAPEFKEKYDHDAKIRHWLDMAMRIEGTNKTFGVHAAGVVISAEPLDEIVPLQ
RNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTLIQKTIDLIQETNGYKIDPDEITGQER
KAQHILAKGQHSTLPKEVQKAYSLLESGDLEGVFQLESSGMKQIVRDLKPSNIEDISSIL
ALYRPGPLDAGLIPKFINRKHRREEIEYETGILEPILNETYGIMVYQEQIMKIAQDMAGY
SLGQADLLRRAMGKKKVSEMQKQEEKFIDGAMKNGVKKQVAEKLFADMLKFAEYCLSYKT
EVLTVEYGLIPIGEIVEKRIECSLFSVDENGNIYTQPIAQWHHRGVQEVYEYCLDDGTII
RATKDHKFMTTIGEMLPIDEIFERDLNLLQVNGLPTE
Download sequence
Identical sequences D7DW01
WP_013192583.1.25658 gi|298492518|ref|YP_003722695.1|

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