SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|297620271|ref|YP_003708408.1| from Waddlia chondrophila WSU 86-1044

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297620271|ref|YP_003708408.1|
Domain Number 1 Region: 239-522
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 6.08e-92
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.0000000605
Further Details:      
 
Domain Number 2 Region: 62-237
Classification Level Classification E-value
Superfamily ThrRS/AlaRS common domain 3.01e-58
Family Threonyl-tRNA synthetase (ThrRS), second 'additional' domain 0.00000714
Further Details:      
 
Domain Number 3 Region: 523-629
Classification Level Classification E-value
Superfamily Class II aaRS ABD-related 6.49e-27
Family Anticodon-binding domain of Class II aaRS 0.00041
Further Details:      
 
Domain Number 4 Region: 2-60
Classification Level Classification E-value
Superfamily TGS-like 0.00000085
Family TGS domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|297620271|ref|YP_003708408.1|
Sequence length 642
Comment Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
Sequence
MKITLRDNSTIETPNGSSAKDLANQLNLKGPEQALAVNINGKNVDLATPLNDGDLVVFWS
FDDREGKEIFWHTSAHVLAQAVLRIYPDAKPTIGPPIETGFYYDFADLSISENDFEKIEN
EMKKIVKENYQSEREVFNTKNEAKSSFASNPYKCEMIDGFSEEEELSGYRQGEFFDLCRG
PHLPNLGKIKAFKLTKTSGAYWRGNSENEMLTRIYGVSFPDRALLKEYLHQMEEAKKRDH
RVIGSKLDLFSFKEEAAGMPFIHPKGMTVWTELTNYLRECLGSANYVEIKTPIMLSRGLW
ETSGHWFNYRENMFTSEIEDHDYAIKPMNCPGCMLYYKSHVHSYRELPLRVAEIGNVHRY
EPSGALSGLFRVRSFHQDDAHIFMKPSDIEGEILSLLNLFEKLYSTFGLSYHLELSTRPE
KGTIGTDEEWEQATAGLKNALDKWGHDYKINEGDGAFYGPKIDFHIRDAINRTWQCGTIQ
LDMALPQRFALEYTASDGERHRPVMLHRAIFGSIERFMGILIEHFAGKFPLWISPLQARI
LTVADRHEPYAHELMQKLKQQGFRVDIDATGESVSKKVRTAQLTQINYILTVGDKEMEHK
TLNLRTRDNVVHGEIDLEAFIIALKKEKEERSLKSPFHKQES
Download sequence
Identical sequences D6YTE1 F8LBF2
gi|297620271|ref|YP_003708408.1| WP_013181130.1.19835 WP_013181130.1.67671

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]