SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|297620642|ref|YP_003708779.1| from Waddlia chondrophila WSU 86-1044

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297620642|ref|YP_003708779.1|
Domain Number 1 Region: 38-140
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.73e-17
Family Cold shock DNA-binding domain-like 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|297620642|ref|YP_003708779.1|
Sequence length 511
Comment ribonuclease G [Waddlia chondrophila WSU 86-1044]
Sequence
MQEILLNIESKEIRCALLKHGVLHDLIVERKKDRQLTGNIYKGKVKNILHNIQSAFIDIN
EGENGFIHISDIIENTKKFHEQFDLEFDLDYDISKINEKKADLNIDEVLKLDQPVLVQVI
KEPMGTKGARLTSNISIAGRYLVLLPNSSHRGVSRRIEDRHTRERLKKLIRSFEMPQDMG
LICRTASAHASPEMLIDEANDLLQNWEQIIEQFNSKEESGILFAESDLIKRALITAADKK
IDRILIDDYNIYQKCKRHYSKYQHEHPLKIELYRDKVPMYERFNVEKEIDKSLRRKIWLN
SGGYLFFDRTEAMYTIDVNSGRSSSSDSNVEETLVQINLEAAEEISRQLRLRNIGGLVIC
DFIDMRYRKNQRRVLDRLRDCMKEDSAKCTILSMSDFGLVEMTRQRSRGSLIQTVFTTCP
YCAGSGLIKTHESVAIELERSLKKVVGLSQQFALKLTVHPELYRYLCIDDKEYLLALADK
MNARLEIEQDDNLHINDFRFYSTTNGEEIET
Download sequence
Identical sequences D6YUG2 F8LEB0
gi|297620642|ref|YP_003708779.1| WP_013181501.1.19835 WP_013181501.1.67671

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]