SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|330838880|ref|YP_004413460.1| from Selenomonas sputigena ATCC 35185

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|330838880|ref|YP_004413460.1|
Domain Number - Region: 152-320
Classification Level Classification E-value
Superfamily ARM repeat 0.000449
Family Armadillo repeat 0.084
Further Details:      
 
Domain Number - Region: 312-368
Classification Level Classification E-value
Superfamily Glutamyl tRNA-reductase dimerization domain 0.0183
Family Glutamyl tRNA-reductase dimerization domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|330838880|ref|YP_004413460.1|
Sequence length 431
Comment hypothetical protein Selsp_1041 [Selenomonas sputigena ATCC 35185]
Sequence
MFWRSWNKADKTLLFAAVVFFLALALVIAYPKSLLARGFLACADAALVGGIADWFAVTAL
FKKPLGFPWHTALLPRRRESFIEASVTLVQKEFFSRRKIFQALQHIDLVARLLEFLRRED
VQEKLVAQFLHYVRSFAMHIDREKQANAFADEMRSELKRSRPEEIFSLIGRWMRDDERDH
VLVARAAQFLAEKAAAPEFSRRVEDLLFNYAKENARSTWDKFLLGIGQIADVVNFADLAH
LVRHQALTVLTELAEKDSALQREFLAVCYEKAEELCADEEFRAFSLELRDAMLRGLPLEE
AIERSLAFVQKHFFLARGRHRFDTVLPLLREKFSAVLVEELRRALALVGKDEKMQRAIDR
LLYDLAARSALAAQDLVAVIVRDVLARLTDEQLNHLVYDKVEPDLLWIRMNGSIVGAGLG
LVIFVLLQLVH
Download sequence
Identical sequences C9LRU8
gi|330838880|ref|YP_004413460.1| WP_006190791.1.43677 WP_006190791.1.73955

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]