SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Hydpi2|172890|fgenesh1_pm.2_#_478 from Hydnomerulius pinastri v2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Hydpi2|172890|fgenesh1_pm.2_#_478
Domain Number 1 Region: 33-389,417-498
Classification Level Classification E-value
Superfamily PLP-dependent transferases 5.18e-123
Family Pyridoxal-dependent decarboxylase 0.0000000415
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Hydpi2|172890|fgenesh1_pm.2_#_478
Sequence length 540
Sequence
MSLSKHINPDRLIRESKDKHHHHHHLTGTDVNKVSHPYGARYGTVSVPKFHLPSKGTGAE
TAYQLIHDELSLDGSPNLNLASFVHTWMPEPANKLMMENMSKNLIDQDEYPMTQLIHTRC
ISILADLWHAPSAQQAIGTATTGSSEAIQLGGLAMKRLWQERRKAAGKSIHEPGPNIVMG
ANAQVALEKFARYFEVECRLVPVSVESKYRLDPKKAMEFVDENTIGIYVILGSTYTGHYE
PVKEMSDLLDEYEKQTGHSVPIHVDGASGAFIAPFAHPKLLWDFKIPRVVSINTSGHKFG
LSYVGVGWVVWRSKEFLPKDLIFELHYLGSVEYSFSLNFSRPAAPIIAQYFNFLHLGFEG
YRAVALDDLKNARLLSRALERTGWYTVLSDIHRLKADSLLAKGAQATVGIDEENPENYEE
GLPVVSFRFSDDFQTKYPEIQQKWIQTLLRAKGWIVPNYELAPNLEHVQILRVVVRENCS
EALIDRLVADTVEITQTLVDRGSSAHALDMLGQSHNHKSNVGQMDEGSGSQSSGTYAKQC
Download sequence
Identical sequences jgi|Hydpi2|172890|fgenesh1_pm.2_#_478

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]