SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|374335679|ref|YP_005092366.1| from Oceanimonas sp. GK1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|374335679|ref|YP_005092366.1|
Domain Number 1 Region: 107-235
Classification Level Classification E-value
Superfamily alpha-helical ferredoxin 4.36e-39
Family Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 0.00000108
Further Details:      
 
Domain Number 2 Region: 1-106
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 9.69e-30
Family 2Fe-2S ferredoxin domains from multidomain proteins 0.0000127
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374335679|ref|YP_005092366.1|
Sequence length 238
Comment succinate dehydrogenase iron-sulfur protein [Oceanimonas sp. GK1]
Sequence
MQVTISVYRYNPETDAKPYMKDYRLDVAEGSDMMVLDALLQLKEQEPSLAFRRSCREGVC
GSDGLNMNGKNGLACITPLSDLLGKDNKVVIRPLPGLPVVRDLVVDMTQFYTQWEKVKPF
LIAEDKQPPARERLQSPEERSKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR
WLIDSRDTATDERLSNLDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGNIKSMLLKRAV
Download sequence
Identical sequences H2FV57
gi|374335679|ref|YP_005092366.1| WP_014292337.1.83795

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]