SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000116804 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000116804
Domain Number 1 Region: 42-149
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.23e-32
Family Spermadhesin, CUB domain 0.00025
Further Details:      
 
Domain Number 2 Region: 166-289
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.96e-19
Family Spermadhesin, CUB domain 0.003
Further Details:      
 
Domain Number 3 Region: 288-325
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000982
Family LDL receptor-like module 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000116804   Gene: ENSDARG00000063293   Transcript: ENSDART00000136608
Sequence length 534
Comment pep:known chromosome:Zv9:18:6963809:6975138:1 gene:ENSDARG00000063293 transcript:ENSDART00000136608 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
XLVLLILIEEGFALAQKTQVALAQNVAVADKKPAHCGTLVQTENGGTFSSPNYPSTYPPN
KECVYILEAHPRKRIQLVFDDIYHIEPSFECRFDNIEIRDGPFIFSPLINRFCGDKSPGI
VTSSGRFLWIKFTSDEELEELGFKVEYSYTADPDFHLHVGGLLNPIPDCQFEMSGADGVI
RSSQVEEENKVKAGEAVDCIWTIRAPPMSKIYLRFLDYQLENSNECKKNFVAVYEGSNAI
EDLKAKFCSTVANDITLDNTVAVVRMWADETSKLSRFRLLFTVFTEPPCSPNAYFCHSNM
CINNTLVCNGVQNCVFPWDENNCREKKPKTFFHQMSKTHGTVIGVSTGVVCLLLIISIFI
QMKQPRKKILCRKGLFSATEMQEVMDPPEYEMFSMQDTDMPEELLEEELEGLQKLHRSAS
MSRCIREHHCGAHNSTTILMTRTNPLSEELSTAVGARSWGSFHGRRSSSRSHHPHTHAYS
AQSLREALEEDELSLEGQVMEEIGYNEVFGRGRGVVMVRNHTNPVQQRSLSMDF
Download sequence
Identical sequences F1R0G6
ENSDARP00000116804

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]