SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1f28A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1f28A
Domain Number 1 Region: 7-295
Classification Level Classification E-value
Superfamily Thymidylate synthase/dCMP hydroxymethylase 5.57e-179
Family Thymidylate synthase/dCMP hydroxymethylase 0.000000469
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1f28A   PDB: 1f28   SUPERFAMILY: 1f28A
Sequence length 297
Comment (A:)
Sequence
MVNAEEQQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIR
GVIEELLWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHF
GAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFY
VHIPSNNHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCH
IYKDHIEALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI
Download sequence
Identical sequences A0A0W4ZD18 P13100
1ci7_A 1ci7_B 1f28_A 1f28_B 1f28_C 1f28_D XP_018224734.1.98194 cath|current|1ci7A00/3-297 cath|current|1ci7B00/3-297 cath|current|1f28A00/3-297 cath|current|1f28B00/3-297 cath|current|1f28C00/3-297 cath|current|1f28D00/3-297 1f28A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]