SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1lbiA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1lbiA
Domain Number 1 Region: 63-329
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 7.62e-75
Family L-arabinose binding protein-like 0.00000000193
Further Details:      
 
Domain Number 2 Region: 4-49
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 1.04e-24
Family GalR/LacI-like bacterial regulator 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1lbiA   PDB: 1lbi   SUPERFAMILY: 1lbiA
Sequence length 360
Comment (A:)
Sequence
mkpvtlydvaeyagvsyqtvsrvvnqashvsaktrekveaamaelnyipnrvaqqlagkq
slligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvs
gliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghq
qiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivpt
amlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqts
vdrllqlsqgqavkgnqllpvslvkrkttlapntqtaspraladslmqlarqvsrlesgq
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Identical sequences A0A0E1L3W2
1lbiA WP_071925347.1.75758 1lbg_A 1lbg_B 1lbg_C 1lbg_D 1lbh_A 1lbh_B 1lbh_C 1lbh_D 1lbi_A 1lbi_B 1lbi_C 1lbi_D

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