SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 2nn6H from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  2nn6H
Domain Number 1 Region: 183-306
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.78e-41
Family Eukaryotic type KH-domain (KH-domain type I) 0.000000253
Further Details:      
 
Domain Number 2 Region: 89-181
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 6.13e-26
Family Cold shock DNA-binding domain-like 0.0000068
Further Details:      
 
Domain Number 3 Region: 40-89
Classification Level Classification E-value
Superfamily Ribosomal L27 protein-like 0.000000000006
Family ECR1 N-terminal domain-like 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2nn6H   PDB: 2nn6
Sequence length 308
Comment (H:)
Sequence
mgsshhhhhhsqdphmamemrlpvarkplserlgrdtkkhlvvpgdtittdtgfmrghgt
ymgeekliasvagsvervnklicvkalktryigevgdivvgritevqqkrwkvetnsrld
svlllssmnlpggelrrrsaedelamrgflqegdlisaevqavfsdgavslhtrslkygk
lgqgvlvqvspslvkrqkthfhdlpcgasvilgnngfiwiyptpehkeeeaggfianlep
vsladrevisrlrnciislvtqrmmlydtsilycyeaslphqikdilkpeimeeivmetr
qrlleqeg
Download sequence
Identical sequences 2nn6H 2nn6_H

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