SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCAFP00000026200 from Canis familiaris 69_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCAFP00000026200
Domain Number 1 Region: 361-543
Classification Level Classification E-value
Superfamily NTF2-like 1.14e-64
Family NTF2-like 0.000000833
Further Details:      
 
Domain Number 2 Region: 96-190
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.33e-38
Family Non-canonical RBD domain 0.0000493
Further Details:      
 
Domain Number 3 Region: 194-349
Classification Level Classification E-value
Superfamily L domain-like 4.76e-32
Family mRNA export factor tap 0.00000187
Further Details:      
 
Domain Number 4 Region: 544-605
Classification Level Classification E-value
Superfamily UBA-like 1.17e-23
Family TAP-C domain-like 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCAFP00000026200   Gene: ENSCAFG00000028462   Transcript: ENSCAFT00000028169
Sequence length 607
Comment pep:novel chromosome:CanFam3.1:X:76017820:76027780:1 gene:ENSCAFG00000028462 transcript:ENSCAFT00000028169 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ENNDDGSSSQGRKKVWSSFRGNFGKRDPHYEHGGYEPQPSHLQEDDETVSMGNVQEDPQV
RHTPYSTRCNKRRVKRHNEGHIHITVWKGRKTLKKEVGENTQDGTSGSWFKITIPYGRKY
DKAWLMNSIQSHCSVPFIPVDFHYVKNQARFFVQDVGTASALKDISYRICDDENRKISIF
VNPSTVPYSVRYKLEPEEMEQLKLTMNKRYDVSQQALDLQSLRFDPDLVGHDIDIILNRR
NCMAATLQIIEENFPELLSLNLSNNKLYGLDGLSDIIEMAPTIKVLNLSKNELNLVWELS
KMKGLKLEELWLEGNPLCDTFPDQPTYISAIRDCFPKLLRLDGQELPPPVIIDADTPCLI
KPCKESYKGSETLKSLVLQFLQQYYLIYDSGDRQGLLGAYHDEACFSLAISFNPEDPAPS
SLCEYSKESRNMKKLKDLSQCVQLLKHTNCDIVCSLCVLPKTQHDLSSLVVDMWFQTEKM
LCFSVNGVFKEEVEGKFQGSVRAFTRTFIVTPASNSSLCIVNDELFVRDATPGETQSAFS
NQETFSSMPTLSQEQQEMVHAFSTQSGMKLEWSQKCLQDNEWNYTRAGQVFTVLQKESKI
PEEAFKQ
Download sequence
Identical sequences F1PDV5
ENSCAFP00000026200 ENSCAFP00000031736 ENSCAFP00000026200 ENSCAFP00000031736

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]