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Domain assignment for FBpp0088484 from Drosophila melanogaster FlyBase 5.12

Domain architecture


Domain assignment details

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Strong hits

Sequence:  FBpp0088484
Domain Number 1 Region: 572-776
Classification Level Classification E-value
Superfamily NTF2-like 2.19e-33
Family NTF2-like 0.0064
Further Details:      
 
Domain Number 2 Region: 420-565
Classification Level Classification E-value
Superfamily L domain-like 4.76e-16
Family mRNA export factor tap 0.0069
Further Details:      
 
Domain Number 3 Region: 164-285
Classification Level Classification E-value
Superfamily L domain-like 0.0000000238
Family mRNA export factor tap 0.045
Further Details:      
 
Domain Number 4 Region: 792-840
Classification Level Classification E-value
Superfamily UBA-like 0.00000156
Family TAP-C domain-like 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: FBpp0088484   Gene: FBgn0036640   Transcript: FBtr0089479
Sequence length 841
Comment type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.30; species=Dmel;
Sequence
MPNQMRVLDFGDGSVPIQLDYPDSKIFSKCSSYGDRVPGTHWNEITVHHKGRLEYSPNPE
QIILDALYQAIDGADFFPVFYQRGKNMDTMLVRNCKAAIDKLFKQRLSINLKGGASIPIS
IQLGVAQYQRHQITPTFHIARVVTRLMKQLIQRDGVDGLLNLDNFGSHPEFKNLVVSLGN
PSILMNVCQVIHNDDNERFRLNGFILSNNRIRDIRPLTLLANVDYALLDLRGNKIKSAER
LCRALEQFRARELLLENNPIVKISNFPANIKSLESNFELVDGKPFNMLHKIFSPLDVEID
LEVDGARIDTNNMWKLPEFENSQHWHAFMIPDPSHEFNQEVFFDFFFIRLDPTLSNFYPC
YYKYINTEHVFLVRNCFDQIAHLVNNCNLEMTIPTGDRIFRYYLRMNVSTVKQHHVDPEE
CIQKAVSQCYVAQNRMLNLERFHSRECLKDVMVSLSSPKILTYVLSVASRKFMTTCSEIR
LCHNKVLVLDGAHVLGMMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYR
LPSEYVRAVKEVFPQLTTLDGVDLQTNPGQSLQKNFLCDTGAYELVGAFLENYLREFEND
EFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNLRNKDYSKASDGVF
FGCTYIVEILLQLPRVTHDFHSLQTDVMHYNGKGAVIYVAGLLRDEPPSTRNGHGSKTDI
GGVLLGFSRQFVVTFDEANLGLGKRARRLKIANERLHITNPSKTAIRNAFSVNFPDPSER
QAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFERALKLFIQKNADHEIPDLAF
A
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Identical sequences Q9VV73
7227.FBpp0088483 FBpp0088483 FBpp0088484 FBpp0088483 NP_524111.3.81976 NP_730179.2.81976 FBpp0088483 FBpp0088484

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