The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
(show help)
Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
Molecular Function |
IC (bits) |
H-Score |
Biological Process |
IC (bits) |
H-Score |
Cellular Component |
IC (bits) |
H-Score |
External link(s) |
Protein: FBpp0111789 Gene: FBgn0014024 Transcript: FBtr0112876 |
Sequence length |
941 |
Comment |
type=protein; loc=X:complement(5213169..5213615,5213687..5213789,5213846..5213966,5214031..5214537,5214592..5215536,5215595..5215770,5215852..5216360,5216423..5216440); ID=FBpp0111789; name=Rnp4F-PD; parent=FBgn0014024,FBtr0112876; dbxref=FlyBase:FBpp0111789,FlyBase_Annotation_IDs:CG3312-PD,REFSEQ:NP_001096884,GB_protein:ABW09340; MD5=45b62dc90f526d0fb886ec9edfa405b0; length=941; release=r5.30; species=Dmel; |
Sequence |
MDADKQLERQLEKELDEMPAEDLDDDAYDEYDLIVIPDQGKGSPQQGHSESPQQEEEHKS
EELRQRSRPTWPPSSAGGDMTTIELISSDDEPSVEETEGGNAAGRGRARNDSSSSSDDVG
VIEGSELESNSEVSSDSDSDSDNAGGGNQLERSYQELNALPSKKFAQMVSLIGIAFKLND
LEKIESSVLELQNLATVPAHVWLKYLKARLVVTQTDEERKAFEEQCAKALGYYYSIPLSE
YVVNYLVDQGNVQNHVLWAKLLADYDVERPDFGDKLRSLISTITDENEAAAFVEMLQKHC
VTWTCNVEQRQMIKSVVDKFKQHLDETTRGWDWSEQHKAHVYDVETLSLDDDLKNAVIRF
IFERSVAKFPIVDVLWLSYIEFIQFEGVTVPENEDENEVTAEMVAKRAKRLGKGFLRNTE
LDLANRGVRSHPSVQLNHRFLDLMERSDFELAEVDEEIRLILQRIVTDMDMTVELHLDYL
AYRIRNTNASDEQQVASLRAAFNHAWEELTVLYGDQADTRYEVLQLWAQVEYTQLGSPDN
GREIWRQIMGYPGSSIRGLLWLNFAQMESEYNGGHGTRDVLRKALSQPVLENGLMVQEFF
RRYERCYGTYESIAACQALDLPVEYVKPRSRIKPNSQSAYPRQQKLKPRQQQQQTNREPL
NREQRRRQAHEQQQQQQQQQKHGIKKSRTEPSGGATSPPSKVKGPANAEAKESNFKYSPN
MEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRA
VAGRDGCLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQEVAAKKLRL
LLPEPGDISSTSASVDVAIKREANGEEQKGDVQERDEQKGEEQKGEEQKGEEPKGEEQKG
DDQIGEEQSGVEQKGDEKKEEEMPAAVPKSNDDFRKLFLKD
|
Download sequence |
 |
Identical sequences |
A8JUY0 Q9W4D2
7227.FBpp0111789 FBpp0070720 FBpp0089396 FBpp0111789 FBpp0070720 NP_001096883.3.81976 NP_001096884.1.81976 NP_511047.2.81976 NP_996353.1.81976 FBpp0070720 FBpp0089396 FBpp0111789 |