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Domain assignment for gi|313674359|ref|YP_004052355.1| from Marivirga tractuosa DSM 4126

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|313674359|ref|YP_004052355.1|
Domain Number 1 Region: 143-275,308-397
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.84e-33
Family Tandem AAA-ATPase domain 0.023
Further Details:      
 
Domain Number 2 Region: 184-222,478-565
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000298
Family Tandem AAA-ATPase domain 0.031
Further Details:      
 
Weak hits

Sequence:  gi|313674359|ref|YP_004052355.1|
Domain Number - Region: 539-621
Classification Level Classification E-value
Superfamily PLP-binding barrel 0.0283
Family Alanine racemase-like, N-terminal domain 0.019
Further Details:      
 
Domain Number - Region: 669-768
Classification Level Classification E-value
Superfamily Ribosome recycling factor, RRF 0.044
Family Ribosome recycling factor, RRF 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|313674359|ref|YP_004052355.1|
Sequence length 935
Comment type iii restriction protein res subunit [Marivirga tractuosa DSM 4126]
Sequence
MTATANQNPEQIARDRIDQMLMDAGWLVQDKSKVNLSAGLGIAVREYQTDIGPADYVLFV
NRKPVGVIEAKREESGEKLTVVEDQSTQYANASLKYNLNKEPLPFVYESTGVITRFTDYR
DPKPRSRPVFHFHQPQTLLDWFDKSETLRARLRKMPTLPETGLRPAQIKAINNLENSFKE
NRPKALIQMATGAGKTFTACTFAYRLLKHVDAKRILFLVDTKNLGEQAEQEFLKYQPVDD
NRKFTELYNVQRLSSSYIATDSQVCISTIQRLYSILKGQELDEEVEKENPNEKGWNWQKK
EPLPVEYTSKNPIEQFDFIIIDEAHRSIYNLWKQVLDYFDAFLIGLTATPDKRTFGFFNQ
NVVSEYTYEDSVSDGVNVPYDVFTIETEISKKGSKIEAKTEQFIEKRDKQSRKQRWERLD
EDFEYTPNKLDKDVVNPNQIRTIIQAFKKALPTIFPDRFDEKGEFEVPKTLIFAKTDSHA
DDIINMVREEFGEGNDFCKKLTYKIEEDPKSVLNRFRNSWAPRIAVTVDMIATGTDVKPL
EVLLFMRDVKSINYFEQMKGRGTRTINFDDLQKVTRTAKHTKTHFVIVDAVGATKSKKTD
SRPLERKPGTPLKDLLGAVAMGAQDEDLFTSLANRLIRLDKQLTEREKTELLKLTNGKAL
NTISKELLEAYDPDTASQIEEDTQKGYAGSSPDEIGKALNKAMEQKRNEATKVFTGELNE
YIENVRKVHDQVIDTINQDKVISAEWDSFTTDKAKDVVKEFSAYIEAHKDEITALSIFYD
QAYNRRALSYHMIKELMEKLKREKPLLAPHYVWEAYNQLENIKENSPKNELVALVSLIRK
VSGIDNELTPYHKTVDKNFQDWVFKQNAGKHNKFTPDQMEWLRMMKDHIANSFHVEVDDL
DYTPFDAKGGRGKMWALFGEETDNVIIELNQNLTA
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Identical sequences E4TLA9
WP_013452398.1.33346 gi|313674359|ref|YP_004052355.1|

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