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Domain assignment for gi|428779231|ref|YP_007171017.1| from Dactylococcopsis salina PCC 8305

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428779231|ref|YP_007171017.1|
Domain Number 1 Region: 10-101
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 5.65e-29
Family Sigma2 domain of RNA polymerase sigma factors 0.0019
Further Details:      
 
Domain Number 2 Region: 106-184
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000000000000118
Family Sigma3 domain 0.048
Further Details:      
 
Domain Number 3 Region: 171-254
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000000000299
Family Sigma4 domain 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428779231|ref|YP_007171017.1|
Sequence length 255
Comment sigma-70 family RNA polymerase sigma factor [Dactylococcopsis salina PCC 8305]
Sequence
MPSPLTENVKQNSLELLKSYQENPSQVTRNCIVELNLGLVRKEAHHWVHQCGENYEDLIQ
VGCIGLIRAIERFQLSKGNAFSSFAIPYIRGEIQHYLRDRSNTVKIPRRWLELRQQAVKV
TSQLREKLNRQPTDTEIAEALNVSMKEWENVKLAAKNREVLSLDLPLGSGEGDETTSLGE
LVPDAQYRSFQLAQEDQIRLQQGLVGLEDKIRQVLEFVFLHDLTQKEAAEMLGVSVVIVS
RRMKKGLKLLKSKML
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Identical sequences K9YTG8
WP_015228671.1.8022 gi|428779231|ref|YP_007171017.1|

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