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Domain assignment for gi|428781408|ref|YP_007173194.1| from Dactylococcopsis salina PCC 8305

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428781408|ref|YP_007173194.1|
Domain Number 1 Region: 52-156
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 4.71e-25
Family Sigma2 domain of RNA polymerase sigma factors 0.0011
Further Details:      
 
Domain Number 2 Region: 163-243
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 8.41e-18
Family Sigma4 domain 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428781408|ref|YP_007173194.1|
Sequence length 248
Comment sigma-70 family RNA polymerase sigma factor [Dactylococcopsis salina PCC 8305]
Sequence
MWFHLGNFIYPYSVLDKREQKMTVSNRPINPPLSASWSNSEAVSVSNTEVSPTQLSDHQL
VLRCQQGVKPDRAMFSELLRRNQSHVEKMLYHLAPDWSDRADLVQEVWIRVYRNIQRLKE
PMKFRGWLSRITTNLFYDELRKRKRVKSPISLDAPRQVDDGELNWEVATDVPSPDQDLSS
QEFYDKLNRAIAALPESFRTTIILREIEGFSYEEISEMTGVSLGTVKSRIARARAKLQSV
LQPYFELH
Download sequence
Identical sequences K9YZC1
gi|428781408|ref|YP_007173194.1|

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